• 2016

    Junliang Shang*, Yingxia Sun, Jin-Xing Liu, Junfeng Xia, Junying Zhang, Chun-Hou Zheng. CINOEDV: a co-information based method for detecting and visualizing n-order epistatic interactions. BMC Bioinformatics. 2016, 17:214.
     
    website: http://www.biomedcentral.com/1471-2105/17/214
     
     
    Shengjun Li, Junliang Shang*, Qinliang Chen, Yan Sun, Jin-Xing Liu. A compressed sensing based two-stage method for detecting epistatic interactions. International Journal of Data Mining and Bioinformatics. 2016, 14(4): 354-372.
     
    Website: http://www.inderscienceonline.com/doi/abs/10.1504/IJDMB.2016.075821


    Yingxia Sun, Junliang Shang*, Jin-Xing Liu, Shengjun Li. An Improved Ant Colony Optimization Algorithm for the Detection of SNP-SNP Interactions. Intelligent Computing Theories and Methodologies. 12th International Conference, ICIC 2016, Lanzhou, China, August 2-5, 2016, Proceedings, Part III. Lecture Notes in Artificial Intelligence. 9773: 21-32.

    Website: http://link.springer.com/chapter/10.1007/978-3-319-42297-8_3




    Xiangzhen Kong, Jinxing Liu*, Chunhou Zheng, Junliang Shang. Gene Extraction Based on Sparse Singular Value Decomposition. Intelligent Computing Theories and Methodologies. 12th International Conference, ICIC 2016, Lanzhou, China, August 2-5, 2016, Proceedings, Part I. Lecture Notes in Computer Science. 9771: 285-293.

    Website:  http://link.springer.com/chapter/10.1007/978-3-319-42291-6_28


     Mi-Xiao Hou, Yin-Lian Gao, Jin-Xing Liu*, Jun-Liang Shang, Chun-Hou Zheng. Comparison of Non-negative Matrix Factorization Methods for Clustering Genomic Data. Intelligent Computing Theories and Methodologies. 12th International Conference, ICIC 2016, Lanzhou, China, August 2-5, 2016, Proceedings, Part II. Lecture Notes in Computer Science. 9772: 290-299.

    Website:  http://link.springer.com/chapter/10.1007/978-3-319-42294-7_25


    Wenxiang Zhang, Junliang Shang*, Huiyu Li, Yingxia Sun, Jin-Xing Liu. SIPSO: Selectively Informed Particle Swarm Optimization Based on Mutual Information to Determine SNP-SNP Interactions. Intelligent Computing Theories and Methodologies. 12th International Conference, ICIC 2016, Lanzhou, China, August 2-5, 2016, Proceedings, Part I. Lecture Notes in Computer Science. 9771: 112-121.

    Website: http://link.springer.com/chapter/10.1007/978-3-319-42291-6_11


    Sheng-Jun Li, Junliang Shang*, Jin-Xing Liu, Huiyu Li. A Compressed Sensing based Feature Extraction Method for Identifying Characteristic Genes. Intelligent Computing Theories and Methodologies. 12th International Conference, ICIC 2016, Lanzhou, China, August 2-5, 2016, Proceedings, Part II. Lecture Notes in Computer Science. 9772: 67-77.

    Website:  http://link.springer.com/chapter/10.1007/978-3-319-42294-7_6

     

  • 2015

    Junliang Shang, Yan Sun, Shengjun Li, Jin-Xing Liu*, Chun-Hou Zheng, Junying Zhang. An Improved Opposition-Based Learning Particle Swarm Optimization for the Detection of SNP-SNP Interactions. BioMed Research International. 2015, 2015 (Article ID 524821).

    Website: http://www.hindawi.com/journals/bmri/2015/524821/
     

    Junliang Shang*, Yan Sun, Yun Fang, Shengjun Li, Jin-Xing Liu, Yuanke Zhang. Hypergraph Supervised Search for Inferring Multiple Epistatic Interactions with Different Orders. Intelligent Computing Theories and Methodologies. 11th International Conference, ICIC 2015, Fuzhou, China, August 20-23, 2015, Proceedings, Part II. Lecture Notes in Computer Science. 9226: 623-633.

    Website: http://link.springer.com/chapter/10.1007/978-3-319-22186-1_62
     

    Jin-Xing Liu, Yong Xu*, Ying-Lian Gao, Dong Wang, Chun-Hou Zheng, Jun-Liang Shang. Semi-supervised Feature Extraction for RNA-Seq Data Analysis. Intelligent Computing Theories and Methodologies. 11th International Conference, ICIC 2015, Fuzhou, China, August 20-23, 2015, Proceedings, Part III. Lecture Notes in Computer Science. 9227: 679-685.

    Website: http://link.springer.com/chapter/10.1007/978-3-319-22053-6_70




    Dong Wang, Jin-Xing Liu*, Ying-Lian Gao, Jun-Liang Shang. Identification genes of colorectal cancer with integrated data via Block-sparse NMFL21. The 2015 International Conference on Electronics, Electrical Engineering and Information Science (EEEIS2015), Guangzhou, China, August 07-09, 2015, 727-736.
  • 2014

    Junliang Shang*, Junying Zhang*, Yan Sun, Yuanke Zhang. EpiMiner: a three-stage co-information based method for detecting and visualizing epistatic interactions. Digital Signal Processing. 2014, 24(2014): 1-13.

    Website: http://www.sciencedirect.com/science/article/pii/S1051200413001838
     

    Ma Changyi, Shang Junliang*, Li Shengjun, Sun Yan. Detection of SNP-SNP Interaction based on the Generalized Particle Swarm Optimization Algorithm. Systems Biology (ISB), 2014 8th International Conference on. 151:155. 24-27 Oct.2014. IEEE. Qingdao, China.

    Website: http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6990748&tag=1
  • 2013

    Junliang Shang*, Junying Zhang*, Xiujuan Lei, Wenying Zhao, Yafei Dong. EpiSIM: simulation of multiple epistasis, linkage disequilibrium patterns and haplotype blocks for genome-wide interaction analysis. Genes & Genomics. 2013, 35(3): 305-316.

    Website: http://link.springer.com/article/10.1007/s13258-013-0081-9
     

    Yuanyuan Zhang, Junying Zhang*, Junliang Shang. Quantitative identification of differentially methylated loci based on relative entropy for matched case-control data. Epigenomics-UK. 2013, 5(6): 631-643.

    Website: http://www.futuremedicine.com/doi/abs/10.2217/epi.13.58
  • 2012

    Junliang Shang*, Junying Zhang*, Xiujuan Lei, Yuanyuan Zhang, Baodi Chen. Incorporating heuristic information into ant colony optimization for epistasis detection. Genes & Genomics. 2012, 34(3): 321-327.

    Website: http://link.springer.com/article/10.1007/s13258-012-0003-2
     

    Yaojun Geng*, Junying Zhang, Xiguo Yuan, Junliang Shang. Gene Selection for Cancer Classification Using Sparse Representation Coefficient and MRMR Criterion. International Journal of Advancements in Computing Technology. 2012, 4(8): 108-117.
  • 2011

    Junliang Shang*, Junying Zhang*, Yan Sun, Dan Liu, Daojun Ye, Yaling Yin. Performance analysis of novel methods for detecting epistasis. BMC Bioinformatics. 2011, 12: 475.

    Website: http://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-12-475
     

    Bo Yang*, Junying Zhang, Junliang Shang, Aimin Li. A Bayesian Network based Algorithm for Gene Regulatory Network Reconstruction. IEEE International conference on Signal Processing, Communications and Computing (ICSPCC). 2011, 09: P5056.

    Website: http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6061811
  • 2010

    尚军亮*, 方敏. 一种优化的高精度灰色GM(1,1)预测模型. 电子与信息学报. 2010, 32(6): 1301-1305.
     

    孙燕*, 尚军亮, 刘三阳. 基于采样优化的蒙特卡罗移动节点定位算法. 系统工程与电子技术. 2010, 32(9): 2001-2004